BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G11SP1|AL428119
(379 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig285 303 1e-82
>3x_Contig285
Length = 777
Score = 303 bits (149), Expect = 1e-82
Identities = 164/172 (95%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 2 atgggatgggaagggagcgcgggggataaataagttttatcttacttatatataatttat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgggatgggaagggagcgcgggggataaataagttttatcttacttatatataatttat 271
Query: 62 atatataawanbatataaattbrccaatttactatgyagatcggtaaaaatatacatttc 121
|||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 270 atatataaaaatatataaatttaccaatttactatgcagatcggtaaaaatatacatttc 211
Query: 122 cccgcggtttcaccccccccttwaaggggtggggtaggaaccgcgggggtta 173
|||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 210 cccgcggtttcaccccccccttaaaggggtgggg-aggaaccgcgggggtta 160
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,351
Number of Sequences: 1807
Number of extensions: 15351
Number of successful extensions: 4253
Number of sequences better than 1.0e-20: 1
length of query: 379
length of database: 10,358,551
effective HSP length: 15
effective length of query: 364
effective length of database: 10,331,446
effective search space: 3760646344
effective search space used: 3760646344
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.2 bits)